Ocorrência de epidemia do mal das folhas em regiões de "escape" do Brasil / Occurrence of South American leaf blight epidemic in escape zones of the Brazil

Entre janeiro e fevereiro de 2013 ocorreu uma epidemia de mal das folhas em regiões consideradas como de "escape" à doença, causando preocupações e indagações nos produtores de borracha e ao setor heveícola como um todo. Uma possível adaptação do fungo a essas zonas foi levantada e a consistência do controle da doença pela utilização do binômio plantas com troca uniforme das folhas + período seco, típicos de regiões de "escape", foi questionada. O objetivo deste trabalho foi trazer informações importantes aos heveicultores sobre a interação clima-patógeno-hospedeiro e comparar variáveis de normais climatológicas (média histórica) e dados climáticos deste período de ocorrência da epidemia (janeiro e fevereiro de 2013). Concluiu-se que não foi o patógeno que se adaptou às plantas de seringueira em clima mais seco, nas regiões de "escape", mas que o clima mais úmido ocorreu nessas regiões mais secas, nesse período.(AU)

In January and February 2013 occurred a South American leaf blight epidemic in regions considered as escape zones, causing concern to rubber tree growers and throughout the rubber industry. A possible adaptation of the fungus to escape zones was raised and the consistency of disease control by the use of the binomial: plants with uniform renewal of leaves + dry season, typical of the escape zones, was questioned. The aim of this work was to bring relevant information to the rubber growers about the interaction climate-pathogen-host and to compare normal climate (historical average) and climatic data of the occurrence period of epidemic (January and February 2013). We conclude that was not the pathogen that has adapted to rubber tree in drier conditions, typical in escape regions, but a more humid climate occurred in these drier regions during this period.(AU)

Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt

Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus

Eucalyptus ESTs associated with resistance to herbicide inhibitors of aromatic and branched-chain amino acid synthesis

Herbicides inhibit enzymatic systems of plants. Acetolactate synthase (ALS, EC = 4.1.3.18) and 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS, EC 2.5.1.19) are key enzymes for herbicide action. Hundreds of compounds inhibit ALS. This enzyme is highly variable, enabling the selective control of weeds in a number of crops. Glyphosate, the only commercial herbicide inhibiting EPSPS is widely used for non-selective control of weeds in many crops. Recently, transgenic crops resistant to glyphosate were developed and have been used by farmers. The aim of this study was the data mining of eucalypt expressed sequence tags (ESTs) in the FORESTs Genome Project database (https://forests.esalq.usp.br) related to these enzymes. Representative amino acid sequences from the NCBI database associated with ALS and EPSPS were blasted with ESTs from the FORESTs database using the tBLASTx option of the blast tool. The best blasting reads and clusters from FORESTs, represented as nucleotide sequences, were blasted back with the NCBI database to evaluate the level of similarity with available sequences from different species. One and seven clusters were identified as showing high similarity with EPSPS and ALS sequences from the literature, respectively. The alignment of EPSPS sequences allowed the identification of conserved regions that can be used to design specific primers for additional sequencings

Eucalyptus ESTs corresponding to the enzyme glutamine synthetase and the protein D1, sites of action of herbicides that cause oxidative stress

This work was aimed at locating Eucalyptus ESTs corresponding to the GS enzyme (Glutamine Synthetase, EC = 6.3.1.2) and to the D1 protein, which are directly related to resistance to herbicides that promote oxidative stress. Glutamine Synthetase corresponds to the site of action of the herbicide glufosinate. Herbicides that belong to groups such as ureas, uracils, triazines and triazinones act on the D1-Qb complex (receptor of electrons from the Photosystem II) by inactivating it. The clusters EGEQRT3302E01.g, EGEQRT3001F12.b; EGEZLV1203B04.g; EGBGFB1211H06.g and EGEZLV1205F09.g enclosed complete sequences (with 356 amino acids) of the Glutamine Synthetase enzyme. The cluster EGEQSL1054G06.g is a consensus of four reads and enclosed a complete sequence of D1 Protein (with 353 amino acids). The comparison of the sequences of Protein D1 from different species showed that the substitutions of serine (S) by glycine (G) or serine (S) by threonine (T) at the position 264 could produce plants resistant to herbicides that act on electron flow on Photosystem II. The sequence of amino acids corresponding to the cluster EGEQSL1054G06.g had a serine in position 264 indicating sensitivity of the Eucalyptus plants to herbicides that act on this site

Eucalyptus ESTs corresponding to the protoporphyrinogen IX oxidase enzyme related to the synthesis of heme, chlorophyll, and to the action of herbicides

This work was aimed at locating Eucalyptus ESTs corresponding to the PROTOX or PPO enzyme (Protoporphyrinogen IX oxidase, E.C. 1.3.3.4) directly related to resistance to herbicides that promote oxidative stress, changing the functionality of this enzyme. PROTOX, which is the site of action of diphenyl-ether (oxyfluorfen, lactofen, fomesafen), oxadiazole (oxadiazon and oxadiargyl), and aryl triazolinone (sulfentrazone and carfentrazone) herbicides, acts on the synthesis route of porphyrins which is associated with the production of chlorophyll a, catalases, and peroxidases. One cluster and one single read were located, with e-values better than e-70, associated to PROTOX. The alignment results between amino acid sequences indicated that this enzyme is adequately represented in the ESTs database of the FORESTs project

Estudo dos fungos anemófilos da cidade de Botucatu e sua correlação com sensibilização em pacientes com doenças alérgicas respiratórias / Study of fungi in the air of Botucatu, Brazil and their correlation with sensitization in patients with respiratory allergic diseases

Objetivos: Estudar a prevalência de fungos anemófilos da cidade de Botucatu, através de um caça-esporos desenvolvido para essa finalidade, e correlacionar esses fungos com sensibilização alérgica em pacientes com asma e rinite. Métodos: Coletaram-se fungos do ar com caçaes-poros padrão volumétrico, no período de junho de 2001 a maio de 2002, semanalmente. Contaram-se as Unidades Formadoras de Colônias (UFC) e identificaram-se os gêneros encontrados; entrevistou-se 119 pacientes de dois serviços de Alergia Clínica da cidade de Botucatu, classificando-os de acordo com a gravidade de suas doenças respiratórias (asma e rinite). Também foram selecionados dez controles sem qualquer doença alérgica atual ou pregressa. Procedeu-se à realização de testes cutâneos de puntura com os aeroalérgenos mais comuns, sendo que para os fungos foi feito também o teste intradérmico. Resultados: O caça-esporos aqui apresentado foi comparativamente melhor do que o método gravitacional. Identificou-se 65 diferentes gêneros de fungos, sendo que os predominantes foram: Cladosporium, leveduras, Epicoccum, Trichoderma, Fusarium, Penicillium, Helminthosporium e Aspergillus; quanto aos testes cutâneos, obteve-se 83,5 per cent de positividade a fungos, sendo que o teste intradérmico mostrou-se muito superior para esse diagnóstico. Os fungos que causaram mais sensibilização não foram os mais freqüentes do ar. Foram eles: Aspergillus, Neurospora, Candida, Penicillium, Cladosporium, Mucor, Chaethomium, Rhizopus, Alternaria, Fuzarium e Metarhizium. Conclusões: Estudo de fungos ambientais pode ser realizado com um caça-esporos mais acessível aos pesquisadores brasileiros; tais fungos representam importantes sensibilizantes em pacientes com asma e rinite e o diagnóstico dessa sensibilização é muito mais eficaz através de testes intradérmicos.